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Research Office

Publications

2022 2021 2020 2019 2018 2017 2016 2015 2014 2013

Publications

    2022

  1. Cooman, T., Trejos, T., Romero, A. H., & Arroyo, L. E. (2022). Implementing machine learning for the identification and classification of compound and mixtures in portable Raman instruments. Chemical Physics Letters, 787139283.

    2. 2021

  2. Abidakun, O., Adebiyi, A., Valiev, D., & Akkerman, V. (2021). Impacts of fuel nonequidiffusivity on premixed flame propagation in channels with open ends. Physics of Fluids, 33(1), 013604.
  3. Aggarwal, K., Agarwal, D., Lewis, E. F., Anna-Thomas, R., Tremblay, J. C., Burke-Spolaor, S., McLaughlin, M. A., & Lorimer, D. R. (2021). Comprehensive analysis of a dense sample of FRB 121102 bursts. The Astrophysical Journal, 922(2), 115.
  4. Dumaz, M., Boucher, R., Marques, M. A., & Romero, A. H. (2021). Authorship and citation cultural nature in Density Functional Theory from solid state computational packages. Scientometrics, 126(8), 6681-6695.
  5. Yang, W., Wang, D., Li, Y., Zhang, Z., Tong, S., Li, M., Zhang, X., Zhang, L., Ren, L., Ma, X., Zhou, R., Sanderson, B. J., Keefover-Ring, K., Yin, T., Smart, L. B., Liu, J., DiFazio, S. P., Olson, M., & Ma, T. (2021). A general model to explain repeated turnovers of sex determination in the Salicaceae. Molecular biology and evolution, 38(3), 968-980.
  6. Singh, S., Lang, L., Dovale-Farelo, V., Herath, U., Tavadze, P., Coudert, F., & Romero, A. H. (2021). MechElastic: A Python library for analysis of mechanical and elastic properties of bulk and 2D materials. Computer Physics Communications, 267108068.
  7. Chapman, J., Garapati, N., Glezakou, V., Duan, Y., Hu, J., & Dinu, C. Z. (2021). Molecular dynamics simulations of a hydrophilic MIL-160-based membrane demonstrate pressure-dependent selective uptake of industrially relevant greenhouse gases. Materials Advances, 2(18), 5922-5934.
  8. Govindarajulu, R., Hostetler, A. N., Xiao, Y., Chaluvadi, S. R., Mauro-Herrera, M., Siddoway, M. L., Whipple, C., Bennetzen, J. L., Devos, K. M., Doust, A. N., & Hawkins, J. S. (2021). Integration of high-density genetic mapping with transcriptome analysis uncovers numerous agronomic QTL and reveals candidate genes for the control of tillering in sorghum. G3, 11(2), jkab024.
  9. Singh, V., Herath, U., Wah, B., Liao, X., Romero, A. H., & Park, H. (2021). DMFTWDFT: An open-source code combining dynamical mean field theory with various density functional theory packages. Computer Physics Communications, 261107778.
  10. Licata, R. J., Mehta, P., & Tobiska, W. K. (2021). Impact of driver and model uncertainty on drag and orbit prediction. Proceedings of the 31st AAS/AIAA Space Flight Mechanics Meeting, .
  11. Kaiser, A. R., & McWilliams, S. T. (2021). Sensitivity of present and future detectors across the black-hole binary gravitational wave spectrum. Classical and Quantum Gravity, 38(5), 055009.
  12. Sefah, E., & Mertz, B. (2021). Bacterial analogs to cholesterol affect dimerization of proteorhodopsin and modulates preferred dimer interface. Journal of Chemical Theory and Computation, 17(4), 2502-2512.
  13. (2021). Homo-oligomerization of the human adenosine A2A receptor is driven by the intrinsically disordered C-terminus. Elife, 10e66662.
  14. Price, B. S., Molstad, A. J., & Sherwood, B. (2021). Estimating multiple precision matrices with cluster fusion regularization. Journal of Computational and Graphical Statistics, 30(4), 823-834.
  15. Ogunfuye, S., Sezer, H., Kodakoglu, F., Farahani, H. F., Rangwala, A. S., & Akkerman, V. (2021). Dynamics of explosions in cylindrical vented enclosures: validation of a computational model by experiments. Fire, 4(1), 9.
  16. Pol, N. S., Taylor, S. R., Kelley, L. Z., Vigeland, S. J., Simon, J., Chen, S., Arzoumanian, Z., Baker, P. T., Bécsy, B., Brazier, A., Brook, P. R., Burke-Spolaor, S., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., DeCesar, M. E., Demorest, P. B., Dolch, T., Ferrara, E. C., Fiore, W., Fonseca, E., Garver-Daniels, N., Good, D. C., Hazboun, J. S., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Key, J. S., Lam, M. T., (2021). Astrophysics milestones for pulsar timing array gravitational-wave detection. The Astrophysical Journal Letters, 911(2), L34.
  17. Arzoumanian, Z., Baker, P. T., Brazier, A., Brook, P. R., Burke-Spolaor, S., Becsy, B., Charisi, M., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., DeCesar, M. E., Demorest, P. B., Dolch, T., Elliott, R. D., Ellis, J. A., Ferrara, E. C., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Good, D. C., Hazboun, J. S., Islo, K., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Kelley, L. Z., Key, J. S., Lam, M. T., (2021). The NANOGrav 11 yr Data Set: Limits on Supermassive Black Hole Binaries in Galaxies within 500 Mpc. The Astrophysical Journal, 914(2), 121.
  18. Pol, N., McLaughlin, M., Lorimer, D. R., & Garver-Daniels, N. (2021). On the Detectability of Ultracompact Binary Pulsar Systems. The Astrophysical Journal, 912(1), 22.
  19. Lang, L., Payne, A., Valencia-Jaime, I., Verstraete, M. J., Bautista-Hernández, A., & Romero, A. H. (2021). Assessing Nickel Titanium Binary Systems Using Structural Search Methods and Ab Initio Calculations. The Journal of Physical Chemistry C, 125(2), 1578-1591.
  20. (2021). Homo-oligomerization of the human adenosine A2A receptor is driven by the intrinsically disordered C-terminus. Elife, 10e66662.
  21. Pol, N. S., Taylor, S. R., Kelley, L. Z., Vigeland, S. J., Simon, J., Chen, S., Arzoumanian, Z., Baker, P. T., Bécsy, B., Brazier, A., Brook, P. R., Burke-Spolaor, S., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., DeCesar, M. E., Demorest, P. B., Dolch, T., Ferrara, E. C., Fiore, W., Fonseca, E., Garver-Daniels, N., Good, D. C., Hazboun, J. S., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Key, J. S., Lam, M. T., (2021). Astrophysics milestones for pulsar timing array gravitational-wave detection. The Astrophysical Journal Letters, 911(2), L34.
  22. Arzoumanian, Z., Baker, P. T., Brazier, A., Brook, P. R., Burke-Spolaor, S., Becsy, B., Charisi, M., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., DeCesar, M. E., Demorest, P. B., Dolch, T., Elliott, R. D., Ellis, J. A., Ferrara, E. C., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Good, D. C., Hazboun, J. S., Islo, K., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Kelley, L. Z., Key, J. S., Lam, M. T., (2021). The NANOGrav 11 yr Data Set: Limits on Supermassive Black Hole Binaries in Galaxies within 500 Mpc. The Astrophysical Journal, 914(2), 121.
  23. Aggarwal, K., Burke-Spolaor, S., Law, C. J., Bower, G. C., Butler, B. J., Demorest, P. B., (2021). Robust Assessment of Clustering Methods for Fast Radio Transient Candidates. The Astrophysical Journal, 914(1), 53.
  24. Witt, C. A., Charisi, M., Taylor, S. R., & Burke-Spolaor, S. (2021). Quasars with Periodic Variability: Capabilities and Limitations of Bayesian Searches for Supermassive Black Hole Binaries in Time-Domain Surveys. arXiv preprint arXiv:2110.07465, .
  25. Pol, N. S., Taylor, S. R., Kelley, L. Z., Vigeland, S. J., Simon, J., Chen, S., Arzoumanian, Z., Baker, P. T., Bécsy, B., Brazier, A., Brook, P. R., Burke-Spolaor, S., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., DeCesar, M. E., Demorest, P. B., Dolch, T., Ferrara, E. C., Fiore, W., Fonseca, E., Garver-Daniels, N., Good, D. C., Hazboun, J. S., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Key, J. S., Lam, M. T., (2021). Astrophysics milestones for pulsar timing array gravitational-wave detection. The Astrophysical Journal Letters, 911(2), L34.
  26. Arzoumanian, Z., Baker, P. T., Brazier, A., Brook, P. R., Burke-Spolaor, S., Becsy, B., Charisi, M., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., DeCesar, M. E., Demorest, P. B., Dolch, T., Elliott, R. D., Ellis, J. A., Ferrara, E. C., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Good, D. C., Hazboun, J. S., Islo, K., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Kelley, L. Z., Key, J. S., Lam, M. T., (2021). The NANOGrav 11 yr Data Set: Limits on Supermassive Black Hole Binaries in Galaxies within 500 Mpc. The Astrophysical Journal, 914(2), 121.
  27. Assumpcao, T., Werneck, L. R., Jacques, T. P., & Etienne, Z. B. (2021). NRPyElliptic: A Fast Hyperbolic Relaxation Elliptic Solver for Numerical Relativity, I: Conformally Flat, Binary Puncture Initial Data. arXiv preprint arXiv:2111.02424, .

    28. 2020

  28. Adebiyi, A., Abidakun, O., & Akkerman, V. (2020). Acceleration of Premixed Flames in Obstructed Pipes with Both Extremes Open. Energies, 13(16), 4094.
  29. Karanji, A. K., Beasley, M., Sharif, D., Ranjbaran, A., Legleiter, J., & Valentine, S. J. (2020). Investigating the interactions of the first 17 amino acid residues of Huntingtin with lipid vesicles using mass spectrometry and molecular dynamics. Journal of Mass Spectrometry, 55(1), e4470.
  30. Lee, J., Caster, K., Maddaleno, T., Donnellan, Z., Selby, T. M., & Goulay, F. (2020). Kinetic study of the CN radical reaction with 2‐methylfuran. International Journal of Chemical Kinetics, 52(11), 838-851.
  31. Wang, M., Zhang, L., Zhang, Z., Li, M., Wang, D., Zhang, X., Xi, Z., Keefover‐Ring, K., Smart, L. B., DiFazio, S. P., Olson, M. S., Yin, T., Liu, J., & Ma, T. (2020). Phylogenomics of the genus Populus reveals extensive interspecific gene flow and balancing selection. New Phytologist, 225(3), 1370-1382.
  32. Zhou, R., Macaya-Sanz, D., Schmutz, J., Jenkins, J. W., Tuskan, G. A., & DiFazio, S. P. (2020). Sequencing and analysis of the sex determination region of Populus trichocarpa. Genes, 11(8), 843.
  33. Simon, S. J., Tschaplinski, T. J., LeBoldus, J. M., Keefover‐Ring, K., Azeem, M., Chen, J., Macaya‐Sanz, D., MacDonald, W. L., Muchero, W., & DiFazio, S. P. (2020). Host plant genetic control of associated fungal and insect species in a Populus hybrid cross. Ecology and Evolution, 10(11), 5119-5134.
  34. Sanzhaeva, U., Poncelet, M., Tseytlin, O., Tseytlin, M., Gencheva, M., Eubank, T. D., Khramtsov, V. V., & Driesschaert, B. (2020). Synthesis, characterization, and application of a highly hydrophilic triarylmethyl radical for biomedical EPR. The Journal of organic chemistry, 85(16), 10388-10398.
  35. Zhang, Y., Garapati, N., Doughty, C., & Jeanne, P. (2020). Modeling study of deep direct use geothermal on the West Virginia university campus-morgantown, WV. Geothermics, 87101848.
  36. Hartman, Z., Geldenhuys, W. J., & Agazie, Y. M. (2020). A specific amino acid context in EGFR and HER2 phosphorylation sites enables selective binding to the active site of Src homology phosphatase 2 (SHP2). Journal of Biological Chemistry, 295(11), 3563-3575.
  37. Skolik, R. A., Geldenhuys, W. J., Konkle, M. E., & Menze, M. A. (2020). Enzymatic Oxidation of Biological Thiols by MitoNEET. The FASEB Journal, 34(S1), 1-1.
  38. Ramachandran, D., McKain, M. R., Kellogg, E. A., & Hawkins, J. S. (2020). Evolutionary dynamics of transposable elements following a shared polyploidization event in the tribe Andropogoneae. G3: Genes, Genomes, Genetics, 10(12), 4387-4398.
  39. Licata, R. J., & Mehta, P. M. (2020). Physics-informed machine learning with autoencoders and LSTM for probabilistic space weather modeling and forecasting. 100th American Meteorological Society Annual Meeting, .
  40. Vallisneri, M., Taylor, S., Simon, J., Folkner, W., Park, R., Cutler, C., Ellis, J., Lazio, T., Vigeland, S., Aggarwal, K., Arzoumanian, Z., Baker, P., Brazier, A., Brook, P., Burke-Spolaor, S., Chatterjee, S., Cordes, J., Cornish, N., Crawford, F., Cromartie, H., Crowter, K., DeCesar, M., Demorest, P., Dolch, T., Ferdman, R., Ferrara, E., Fonseca, E., Garver-Daniels, N., Gentile, P., Good, D., Hazboun, J., Holgado, A., Huerta, E., Islo, K., Jennings, R., Jones, G., Jones, M., Kaplan, D., Kelley, L., Key, J., Lam, M., Levin, L., Lorimer, D., Luo, J., Lynch, R., Madison, D., McLaughlin, M., McWilliams, S., Mingarelli, C., Ng, C., Nice, D., Pennucci, T., Pol, N., Ransom, S., Ray, P., Siemens, X., Spiewak, R., Stairs, I., Stinebring, D., Stovall, K., Swiggum, J., Haasteren, R. v., Witt, C., & Zhu, W. (2020). Modeling the uncertainties of solar system ephemerides for robust gravitational-wave searches with pulsar-timing arrays. The Astrophysical Journal, 893(2), 112.
  41. Hazboun, J., Simon, J., Taylor, S., Lam, M., Vigeland, S., Islo, K., Key, J., Arzoumanian, Z., Baker, P., Brazier, A., Brook, P., Burke-Spolaor, S., Chatterjee, S., Cordes, J., Cornish, N., Crawford, F., Crowter, K., Cromartie, H., DeCesar, M., Demorest, P., Dolch, T., Ellis, J., Ferdman, R., Ferrara, E., Fonseca, E., Garver-Daniels, N., Gentile, P., Good, D., Holgado, A., Huerta, E., Jennings, R., Jones, G., Jones, M., Kaiser, A., Kaplan, D., Kelley, L., Lazio, T., Levin, L., Lommen, A., Lorimer, D., Luo, J., Lynch, R., Madison, D., McLaughlin, M., McWilliams, S., Mingarelli, C., Ng, C., Nice, D., Pennucci, T., Pol, N., Ransom, S., Ray, P., Siemens, X., Spiewak, R., Stairs, I., Stinebring, D., Stovall, K., Swiggum, J., Turner, J., Vallisneri, M., Haasteren, R. V., Witt, C., Zhu, W., & Collaboration, N. (2020). The nanograv 11 yr data set: Evolution of gravitational-wave background statistics. The Astrophysical Journal, 890(2), 108.
  42. Tong, X., Mebane, D. S., (2020). Analyzing the grain‐boundary resistance of oxide‐ion conducting electrolytes: Poisson‐Cahn vs Poisson‐Boltzmann theories. Journal of the American Ceramic Society, 103(1), 5-22.
  43. Tong, X., Bowman, W. J., Mejia-Giraldo, A., Crozier, P. A., & Mebane, D. S. (2020). New Data-Driven Interacting-Defect Model Describing Nanoscopic Grain Boundary Compositions in Ceramics. The Journal of Physical Chemistry C, 124(43), 23619-23625.
  44. Burns, V., & Mertz, B. (2020). Using Simulation to Understand the Role of Titration on the Stability of a Peptide–Lipid Bilayer Complex. Langmuir, 36(41), 12272-12280.
  45. Saldanha, J., Price, B., & Thomas, D. J. (2020). A non-parametric approach for setting safety stock levels. Available at SSRN 3624998, .
  46. Yasin, A. S., & Musho, T. D. (2020). A machine learning approach for increased throughput of density functional theory substitutional alloy studies. Computational Materials Science, 181109726.
  47. Tempke, R., Thomas, L., Wildfire, C., Shekhawat, D., & Musho, T. (2020). Machine Learning Approach for Transforming Scattering Parameters to Complex Permittivity. arXiv preprint arXiv:2007.01443, .
  48. Arzoumanian, Z., Baker, P. T., Brazier, A., Brook, P. R., Burke-Spolaor, S., Bécsy, B., Charisi, M., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., Crowter, K., DeCesar, M. E., Demorest, P. B., Dolch, T., Elliott, R. D., Ellis, J. A., Ferdman, R. D., Ferrara, E. C., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Good, D. C., Hazboun, J. S., Islo, K., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Kelley, L. Z., Key, J. S., Lam, M. T., (2020). Multimessenger gravitational-wave searches with pulsar timing arrays: application to 3C 66B using the NANOGrav 11-year data set. The Astrophysical Journal, 900(2), 102.
  49. Arzoumanian, Z., Baker, P. T., Brazier, A., Brook, P. R., Burke-Spolaor, S., Bécsy, B., Charisi, M., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., Crowter, K., DeCesar, M. E., Demorest, P. B., Dolch, T., Elliott, R. D., Ellis, J. A., Ferdman, R. D., Ferrara, E. C., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Good, D. C., Hazboun, J. S., Islo, K., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Kelley, L. Z., Key, J. S., Lam, M. T., (2020). Multimessenger gravitational-wave searches with pulsar timing arrays: application to 3C 66B using the NANOGrav 11-year data set. The Astrophysical Journal, 900(2), 102.
  50. Arzoumanian, Z., Baker, P. T., Brazier, A., Brook, P. R., Burke-Spolaor, S., Bécsy, B., Charisi, M., Chatterjee, S., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., Crowter, K., DeCesar, M. E., Demorest, P. B., Dolch, T., Elliott, R. D., Ellis, J. A., Ferdman, R. D., Ferrara, E. C., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Good, D. C., Hazboun, J. S., Islo, K., Jennings, R. J., Jones, M. L., Kaiser, A. R., Kaplan, D. L., Kelley, L. Z., Key, J. S., Lam, M. T., (2020). Multimessenger gravitational-wave searches with pulsar timing arrays: application to 3C 66B using the NANOGrav 11-year data set. The Astrophysical Journal, 900(2), 102.
  51. Wang, J., Koganti, P. P., & Yao, J. (2020). Systematic identification of long intergenic non-coding RNAs expressed in bovine oocytes. Reproductive Biology and Endocrinology, 18(1), 1-9.
  52. Mewes, V., Zlochower, Y., Campanelli, M., Baumgarte, T. W., Etienne, Z. B., (2020). Numerical relativity in spherical coordinates: A new dynamical spacetime and general relativistic MHD evolution framework for the Einstein Toolkit. Physical Review D, 101(10), 104007.
  53. Lewandowski, C. W., Knowles, T. D., Etienne, Z. B., & D’Urso, B. (2020). Active optical table tilt stabilization. Review of Scientific Instruments, 91(7), 076102.
  54. Mewes, V., Zlochower, Y., Campanelli, M., Baumgarte, T. W., Etienne, Z. B., (2020). SphericalNR: a dynamical spacetime and general relativistic MHD evolution framework in spherical coordinates for the Einstein toolkit. Phys. Rev. D, 101104007.
  55. Gaertner, B., Fernandez, R., & Zegre, N. (2020). Twenty-first century streamflow and climate change in forest catchments of the central appalachian mountains region, US. Water, 12(2), 453.

    56. 2019

  56. Adebiyi, A., Abidakun, O., Idowu, G., Valiev, D., & Akkerman, V. (2019). Analysis of nonequidiffusive premixed flames in obstructed channels. Physical Review Fluids, 4(6), 063201.
  57. Adebiyi, A., Alkandari, R., Valiev, D., & Akkerman, V. (2019). Effect of surface friction on ultrafast flame acceleration in obstructed cylindrical pipes. AIP Advances, 9(3), 035249.
  58. Caster, K. L., Donnellan, Z. N., Selby, T. M., & Goulay, F. (2019). Kinetic Investigations of the CH (X2Π) Radical Reaction with Cyclopentadiene. The Journal of Physical Chemistry A, 123(27), 5692-5703.
  59. Carlson, C. H., Gouker, F. E., Crowell, C. R., Evans, L., DiFazio, S. P., Smart, C. D., & Smart, L. B. (2019). Joint linkage and association mapping of complex traits in shrub willow (Salix purpurea L.). Annals of Botany, 124(4), 701-715.
  60. Gouker, F. E., DiFazio, S. P., Bubner, B., Zander, M., & Smart, L. B. (2019). Genetic diversity and population structure of native, naturalized, and cultivated Salix purpurea. Tree Genetics & Genomes, 15(3), 1-14.
  61. Meymian, N. Z., Clark, N., Subramanian, J., Heiskell, G., Johnson, D., Mahmudzadeh, F., Darzi, M., Musho, T., & Famouri, P. (2019). Quantification of windage and vibrational losses in flexure springs of a one kW two-stroke free piston linear engine alternator. Cryogenics, (2019-01-0816), .
  62. Garapati, N., Alonge, O. B., Hall, L., Irr, V. J., Zhang, Y., Smith, J. D., Jeanne, P., & Doughty, C. (2019). Feasibility of development of geothermal deep direct-use district heating and cooling system at west Virginia university campus-Morgantown, WV. Energy & Fuels, (DOE-WVU-SGW), .
  63. Geldenhuys, W. J., Long, T. E., Saralkar, P., Iwasaki, T., Nuñez, R. A., Nair, R. R., Konkle, M. E., Menze, M. A., Pinti, M. V., Hollander, J. M., Hazlehurst, L. A., & Robart, A. R. (2019). Crystal structure of the mitochondrial protein mitoNEET bound to a benze-sulfonide ligand. Communications chemistry, 2(1), 1-9.
  64. Fan, H., Masaya, T. W., & Goulay, F. (2019). Effect of surface–bulk partitioning on the heterogeneous oxidation of aqueous saccharide aerosols. Physical Chemistry Chemical Physics, 21(6), 2992-3001.
  65. Bourgalais, J., Caster, K. L., Durif, O., Osborn, D. L., (2019). Product detection of the CH radical reactions with ammonia and methyl-substituted amines. The Journal of Physical Chemistry A, 123(11), 2178-2193.
  66. Licata, R., & Mehta, P. M. (2019). Physics-informed machine learning for probabilistic space weather modeling and forecasting: Thermosphere and satellite drag. AGU Fall Meeting Abstracts, 2019SM31E-3198.
  67. Aggarwal, K., Arzoumanian, Z., Baker, P., Brazier, A., Brinson, M., Brook, P., Burke-Spolaor, S., Chatterjee, S., Cordes, J., Cornish, N., Crawford, F., Crowter, K., Cromartie, H., DeCesar, M., Demorest, P., Dolch, T., Ellis, J., Ferdman, R., Ferrara, E., Fonseca, E., Garver-Daniels, N., Gentile, P., Hazboun, J., Holgado, A., Huerta, E., Islo, K., Jennings, R., Jones, G., Jones, M., Kaiser, A., Kaplan, D., Kelley, L., Key, J., Lam, M., Lazio, T., Levin, L., Lorimer, D., Luo, J., Lynch, R., Madison, D., McLaughlin, M., McWilliams, S., Mingarelli, C., Ng, C., Nice, D., Pennucci, T., Pol, N., Ransom, S., Ray, P., Siemens, X., Simon, J., Spiewak, R., Stairs, I., Stinebring, D., Stovall, K., Swiggum, J., Taylor, S., Turner, J., Vallisneri, M., Haasteren, R. v., Vigeland, S., Witt, C., Zhu, W., & Collaboration, N. (2019). The NANOGrav 11 yr data set: limits on gravitational waves from individual supermassive black hole binaries. The Astrophysical Journal, 880(2), 116.
  68. Nelson, P. E., Etienne, Z. B., McWilliams, S. T., & Nguyen, V. (2019). Induced spins from scattering experiments of initially nonspinning black holes. Physical Review D, 100(12), 124045.
  69. Ostace, A., Kocan, K. X., Mebane, D. S., Schmal, J. P., & Bhattacharyya, D. (2019). Probabilistic Model Building with Uncertainty Quantification and Propagation for a Dynamic Fixed Bed CO2 Capture Process. Energy & Fuels, 34(2), 2516-2532.
  70. Westerfield, J., Gupta, C., Scott, H., Ye, Y., Cameron, A., Mertz, B., & Barrera, F. N. (2019). Ions Modulate Key Interactions between pHLIP and Lipid Membranes. Biophysical Journal, 117(5), 920-929.
  71. Lee, C., Sekharan, S., & Mertz, B. (2019). Theoretical Insights into the Mechanism of Wavelength Regulation in Blue-Absorbing Proteorhodopsin. The Journal of Physical Chemistry B, 123(50), 10631-10641.
  72. Yang, H., Bright, J., Kasani, S., Zheng, P., Musho, T., Chen, B., Huang, L., & Wu, N. (2019). Metal–organic framework coated titanium dioxide nanorod array p–n heterojunction photoanode for solar water-splitting. Nano Research, 12(3), 643-650.
  73. Yasin, A. S., Liu, B., Wu, N., & Musho, T. (2019). Density functional theory evaluation of cation-doped bismuth molybdenum oxide photocatalysts for nitrogen fixation. Computational Materials Science, 15865-75.
  74. Bai, X., Robinson, B., Musho, T., Killmer, C., Wang, Y., & Hu, J. (2019). Microwave Catalytic Reactor for Converting Light Alkane to Aromatics. 2019 AIChE Annual Meeting, .
  75. Demir, S., Sezer, H., Bush, T., & Akkerman, V. (2019). Promotion and mitigation of premixed flame propagation in a gaseous-dusty environment with various dust distributions. Fire Safety Journal, 105270-276.
  76. Porth, O., Chatterjee, K., Narayan, R., Gammie, C. F., Mizuno, Y., Anninos, P., Baker, J. G., Bugli, M., Chan, C., Davelaar, J., Zanna, L. D., Etienne, Z. B., Fragile, P. C., Kelly, B. J., Liska, M., Markoff, S., McKinney, J. C., Mishra, B., Noble, S. C., Olivares, H., Prather, B., Rezzolla, L., Ryan, B. R., Stone, J. M., Tomei, N., White, C. J., Younsi, Z., Akiyama, K., Alberdi, A., Alef, W., Asada, K., Azulay, R., Baczko, A., Ball, D., Baloković, M., Barrett, J., Bintley, D., Blackburn, L., Boland, W., Bouman, K. L., Bower, G. C., Bremer, M., Brinkerink, C. D., Brissenden, R., Britzen, S., Broderick, A. E., Broguiere, D., Bronzwaer, T., Byun, D., Carlstrom, J. E., Chael, A., Chatterjee, S., Chen, M., Chen, Y., Cho, I., Christian, P., Conway, J. E., Cordes, J. M., Geoffrey, B., Cui, Y., Laurentis, M. D., Deane, R., Dempsey, J., Desvignes, G., Doeleman, S. S., Eatough, R. P., Falcke, H., Fish, V. L., Fomalont, E., Fraga-Encinas, R., Freeman, B., Friberg, P., Fromm, C. M., Gomez, J. L., Galison, P., Garcia, R., Gentaz, O., Georgiev, B., Goddi, C., Gold, R., Gu, M., Gurwell, M., Hada, K., Hecht, M. H., Hesper, R., Ho, L. C., Ho, P., Honma, M., Huang, C. L., Huang, L., Hughes, D. H., Ikeda, S., Inoue, M., Issaoun, S., James, D. J., Jannuzi, B. T., Janssen, M., Jeter, B., Jiang, W., Johnson, M. D., Jorstad, S., Jung, T., Karami, M., Karuppusamy, R., Kawashima, T., Keating, G. K., Kettenis, M., Kim, J., Kim, J., Kim, J., Kino, M., Koay, J. Y., Patrick, M. K., Koyama, S., Kramer, M., Kramer, C., Krichbaum, T. P., Kuo, C., Lauer, T. R., Lee, S., Li, Y., Li, Z., Lindqvist, M., Liu, K., Liuzzo, E., Lo, W., Lobanov, A. P., Loinard, L., Lonsdale, C., Lu, R., MacDonald, N. R., Mao, J., Marrone, D. P., Marscher, A. P., Marti-Vidal, I., Matsushita, S., Matthews, L. D., Medeiros, L., Menten, K. M., Mizuno, I., Moran, J. M., Moriyama, K., Moscibrodzka, M., Mueller, C., Nagai, H., Nagar, N. M., Nakamura, M., Narayanan, G., Natarajan, I., & Neri, R. (2019). The event horizon general relativistic magnetohydrodynamic code comparison project. The Astrophysical Journal Supplement Series, 243(2), 26.
  77. Silberman, Z. J., Adams, T. R., Faber, J. A., Etienne, Z. B., & Ruchlin, I. (2019). Numerical generation of vector potentials from specified magnetic fields. Journal of Computational Physics, 379421-437.
  78. Yu, Z., Liu, S., Wang, J., Wei, X., Schuler, J., Sun, P., Harper, R., & Zegre, N. (2019). Natural forests exhibit higher carbon sequestration and lower water consumption than planted forests in China. Global change biology, 25(1), 68-77.
  79. Young, D., Zegre, N., Edwards, P., & Fernandez, R. (2019). Assessing streamflow sensitivity of forested headwater catchments to disturbance and climate change in the central Appalachian Mountains region, USA. Science of the Total Environment, 694133382.
  80. Guillen, L. A., Zegre, N., McNeil, B. E., & Brzostek, E. R. (2019). The importance of field-based drought experiments in the setting of a pluvial: transpiration dynamics of two dominant broad-leaved tree species in West Virginia.. AGU Fall Meeting 2019, .

    81. 2018

  81. Barbero, E. J., & Bedard, A. J. (2018). Electrical percolation threshold of magnetostrictive inclusions in a piezoelectric matrix composite as a function of relative particle size. Computational Particle Mechanics, 5(2), 227-238.
  82. Tuskan, G. A., Groover, A. T., Schmutz, J., DiFazio, S. P., Myburg, A., Grattapaglia, D., Smart, L. B., Yin, T., Aury, J., Kremer, A., Leroy, T., Provost, G. L., Plomion, C., Carlson, J. E., Randall, J., Westbrook, J., Grimwood, J., Muchero, W., Jacobson, D., & Michener, J. K. (2018). Hardwood tree genomics: unlocking woody plant biology. Frontiers in plant science, 1799.
  83. Meymian, N. Z., Clark, N. N., Musho, T., Darzi, M., Johnson, D., & Famouri, P. (2018). An optimization method for flexural bearing design for high-stroke high-frequency applications. Cryogenics, 9582-94.
  84. Sridhara, P., Anderson, B. J., Garapati, N., Seol, Y., & Myshakin, E. M. (2018). Novel Technological Approach To Enhance Methane Recovery from Class 2 Hydrate Deposits by Employing CO2 Injection. Energy & Fuels, 32(3), 2949-2961.
  85. Bland, C. L., Byrne‐Hoffman, C. N., Fernandez, A., Rellick, S. L., Deng, W., & Klinke, D. J. (2018). Exosomes derived from B16F0 melanoma cells alter the transcriptome of cytotoxic T cells that impacts mitochondrial respiration. The FEBS journal, 285(6), 1033-1050.
  86. Zhou, R., Macaya-Sanz, D., Rodgers-Melnick, E., Carlson, C. H., Gouker, F. E., Evans, L. M., Schmutz, J., Jenkins, J. W., Yan, J., Tuskan, G. A., Smart, L. B., & DiFazio, S. P. (2018). Characterization of a large sex determination region in Salix purpurea L. (Salicaceae). Molecular Genetics and Genomics, 293(6), 1437-1452.
  87. Arzoumanian, Z., Baker, P., Brazier, A., Burke-Spolaor, S., Chamberlin, S., Chatterjee, S., Christy, B., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., Crowter, K., DeCesar, M., Demorest, P. B., Dolch, T., Ellis, J. A., Ferdman, R. D., Ferrara, E., Folkner, W., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Haas, R., Hazboun, J., Huerta, E., Islo, K., Jones, G., Jones, M. L., Kaplan, D. L., Kaspi, V. M., Lam, M. T., (2018). The NANOGrav 11 year data set: pulsar-timing constraints on the stochastic gravitational-wave background. The Astrophysical Journal, 859(1), 47.
  88. Gupta, C., Ren, Y., & Mertz, B. (2018). Cooperative Non-bonded Forces Control Membrane Binding of the pH-Low Insertion Peptide pHLIP. Biophysical Journal, 115(12), 2403-2412.
  89. Faramarzi, S., Feng, J., & Mertz, B. (2018). Allosteric effects of the proton donor on the microbial proton pump proteorhodopsin. Biophysical journal, 115(7), 1240-1250.
  90. Li, J., Musho, T., Bright, J., & Wu, N. (2018). Functionalization of a metal-organic framework semiconductor for tuned band structure and catalytic activity. Journal of The Electrochemical Society, 166(5), H3029.
  91. Musho, T. D., & Yasin, A. S. (2018). Ab-initio Study of the Electron Mobility in a Functionalized UiO-66 Metal Organic Framework. Journal of Electronic Materials, 47(7), 3692-3700.
  92. Tempke, R., Wildfire, C., Shekhawat, D., & Musho, T. (2018). Dielectric measurement of powdery materials using a coaxial transmission line. arXiv preprint arXiv:1810.11472, .
  93. Arzoumanian, Z., Baker, P., Brazier, A., Burke-Spolaor, S., Chamberlin, S., Chatterjee, S., Christy, B., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., Crowter, K., DeCesar, M., Demorest, P. B., Dolch, T., Ellis, J. A., Ferdman, R. D., Ferrara, E., Folkner, W., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Haas, R., Hazboun, J., Huerta, E., Islo, K., Jones, G., Jones, M. L., Kaplan, D. L., Kaspi, V. M., Lam, M. T., (2018). The NANOGrav 11 year data set: pulsar-timing constraints on the stochastic gravitational-wave background. The Astrophysical Journal, 859(1), 47.
  94. Singh, S., Valencia-Jaime, I., Pavlic, O., & Romero, A. H. (2018). Elastic, mechanical, and thermodynamic properties of Bi-Sb binaries: Effect of spin-orbit coupling. Physical Review B, 97(5), 054108.
  95. Arzoumanian, Z., Brazier, A., Burke-Spolaor, S., Chamberlin, S., Chatterjee, S., Christy, B., Cordes, J. M., Cornish, N. J., Crawford, F., Cromartie, H. T., Crowter, K., DeCesar, M. E., Demorest, P. B., Dolch, T., Ellis, J. A., Ferdman, R. D., Ferrara, E. C., Fonseca, E., Garver-Daniels, N., Gentile, P. A., Halmrast, D., Huerta, E., Jenet, F. A., Jessup, C., Jones, G., Jones, M. L., Kaplan, D. L., Lam, M. T., (2018). The NANOGrav 11-year data set: high-precision timing of 45 millisecond pulsars. The Astrophysical Journal Supplement Series, 235(2), 37.
  96. Mewes, V., Zlochower, Y., Campanelli, M., Ruchlin, I., Etienne, Z. B., & Baumgarte, T. W. (2018). Numerical relativity in spherical coordinates with the Einstein Toolkit. Physical Review D, 97(8), 084059.
  97. Etienne, Z., Ruchlin, I., & Baumgarte, T. (2018). SENR/NRPy+: Numerical Relativity in Singular Curvilinear Coordinate Systems. APS April Meeting Abstracts, 2018S13. 004.
  98. Guillen, L. A., Zegre, N., & Fernandez, R. (2018). Evaluating the Stability of Headwater Reference Catchments from Long-Term Paired Watershed Studies: an Eastern Perspective.. AGU Fall Meeting Abstracts, 2018H33L-2236.

    99. 2017

  99. Zurhelle, A. F., Tong, X., Klein, A., Mebane, D. S., (2017). A space‐charge treatment of the increased concentration of reactive species at the surface of a ceria solid solution. Angewandte Chemie, 129(46), 14708-14712.
  100. Li, K., Mahapatra, P., Bhat, K. S., Miller, D. C., & Mebane, D. S. (2017). Multi-scale modeling of an amine sorbent fluidized bed adsorber with dynamic discrepancy reduced modeling. Reaction Chemistry & Engineering, 2(4), 550-560.
  101. Faramarzi, S., Bonnett, B., Scaggs, C. A., Hoffmaster, A., Grodi, D., Harvey, E., & Mertz, B. (2017). Molecular dynamics simulations as a tool for accurate determination of surfactant micelle properties. Langmuir, 33(38), 9934-9943.
  102. Cai, M., Marelli, U. K., Mertz, B., Beck, J. G., Opperer, F., Rechenmacher, F., Kessler, H., & Hruby, V. J. (2017). Structural Insights into Selective Ligand–Receptor Interactions Leading to Receptor Inactivation Utilizing Selective Melanocortin 3 Receptor Antagonists. Biochemistry, 56(32), 4201-4209.
  103. Prince, J., (2017). A Novel Approach to Battlefield Wound Assessment and Treatment for Forward Surgical Teams. HDIAC Journal, 440-45.
  104. Koneru, A., & Musho, T. D. (2017). Predicting the Spin Seebeck Voltage in Spin-polarized Materials: A Quantum Mechanical Transport Model Approach. arXiv preprint arXiv:1712.04074, .
  105. Li, J., Musho, T., Bright, J., & Wu, N. (2017). Transformation of a Metal-organic Framework for Tuned Catalytic Activity. arXiv preprint arXiv:1704.06863, .
  106. Kelly, B. J., Baker, J. G., Etienne, Z. B., Giacomazzo, B., & Schnittman, J. (2017). Prompt electromagnetic transients from binary black hole mergers. Physical Review D, 96(12), 123003.
  107. Kelly, B., Etienne, Z., Giacomazzo, B., Baker, J., & Schnittman, J. (2017). Distinguishing transients from merger characteristics in EM signals from black hole binary mergers.. APS April Meeting Abstracts, 2017R3. 005.
  108. Fernandez, R., & Zegre, N. (2017). Assessment of 21st century change of climate drivers to hydrological change across the Appalachian Region. AGU Fall Meeting Abstracts, 2017GC31F-02.

    109. 2016

  109. Bourgalais, J., Spencer, M., Osborn, D. L., Goulay, F., & Picard, S. L. (2016). Reactions of atomic carbon with butene isomers: Implications for molecular growth in carbon-rich environments. The Journal of Physical Chemistry A, 120(46), 9138-9150.
  110. Li, K., Kress, J. D., & Mebane, D. S. (2016). The Mechanism of CO2 Adsorption under Dry and Humid Conditions in Mesoporous Silica-Supported Amine Sorbents. The Journal of Physical Chemistry C, 120(41), 23683-23691.
  111. Lee, C., & Mertz, B. (2016). Theoretical evidence for multiple charge transfer pathways in Bacteriorhodopsin. Journal of Chemical Theory and Computation, 12(4), 1639-1646.
  112. Yasin, A. S., Li, J., Wu, N., & Musho, T. (2016). Study of the inorganic substitution in a functionalized UiO-66 metal–organic framework. Physical Chemistry Chemical Physics, 18(18), 12748-12754.
  113. Musho, T., Li, J., & Wu, N. (2016). Thermodynamics of the oxygen evolution electrocatalysis in a functionalized UiO‐66 metal‐organic frameworks. International Journal of Quantum Chemistry, 116(15), 1153-1159.
  114. Singh, S., Garcia-Castro, A., Valencia-Jaime, I., Munoz, F., & Romero, A. H. (2016). Prediction and control of spin polarization in a Weyl semimetallic phase of BiSb. Physical Review B, 94(16), 161116.

    115. 2015

  115. Bilgili, S. A.(2015). Acceleration of Non-Equidiffusive Flames in Channels: Computational Simulations and Analytical Studies. Journal of Mass Spectrometry, .
  116. Hawkins, J. S., Ramachandran, D., Henderson, A., Freeman, J., Carlise, M., Harris, A., & Willison-Headley, Z. (2015). Phylogenetic reconstruction using four low-copy nuclear loci strongly supports a polyphyletic origin of the genus Sorghum. Annals of Botany, 116(2), 291-299.
  117. Arndt, J. R., Kondalaji, S. G., Maurer, M. M., Parker, A., Legleiter, J., & Valentine, S. J. (2015). Huntingtin N-terminal monomeric and multimeric structures destabilized by covalent modification of heteroatomic residues. Biochemistry, 54(28), 4285-4296.
  118. Blair, J., & Mebane, D. S. (2015). A Bayesian approach to electrical conductivity relaxation and isotope exchange/secondary ion mass spectrometry. Solid State Ionics, 27047-53.
  119. Feng, J., Brown, M. F., & Mertz, B. (2015). Retinal flip in rhodopsin activation?. Biophysical journal, 108(12), 2767-2770.
  120. Mertz, B., Feng, J., Corcoran, C., & Neeley, B. (2015). Explaining the mobility of retinal in activated rhodopsin and opsin. Photochemical & Photobiological Sciences, 14(11), 1952-1964.
  121. Musho, T., & Wu, N. (2015). Ab initio calculation of electronic charge mobility in metal–organic frameworks. Physical Chemistry Chemical Physics, 17(39), 26160-26165.
  122. Musho, T.(2015). Predicting the figure of merit of nanostructured thermoelectric materials. Journal of Materials Research, 30(17), 2628-2637.
  123. Musho, T., Li, J., & Wu, N. (2015). Thermodynamics of the Oxygen Evolution Electrocatalysis in Metal-Organic Frameworks. arXiv preprint arXiv:1510.04851, .
  124. Etienne, Z. B., Paschalidis, V., Haas, R., Mösta, P., & Shapiro, S. L. (2015). IllinoisGRMHD: an open-source, user-friendly GRMHD code for dynamical spacetimes. Classical and Quantum Gravity, 32(17), 175009.

    125. 2014

  125. Hawkins, J. S., Delgado, V., Feng, L., Carlise, M., Dooner, H. K., & Bennetzen, J. L. (2014). Variation in allelic expression associated with a recombination hotspot in Zea mays. The Plant Journal, 79(3), 375-384.
  126. Musho, T. D., Li, J., & Wu, N. (2014). Band gap modulation of functionalized metal-organic frameworks. Phys Chem Chem Phys, 16(43), 23646-53.
  127. Musho, T., Koneru, A., & Mebane, D. (2014). Predicting the Influence of Secondary Phases on the Thermoelectric Performance in Cobalt Containing Spinels (ACo2O4; A={Co,Ni,Zn}). APS March Meeting Abstracts, 2014Y25. 006.

    128. 2013

  128. Garapati, N.(2013). Reservoir simulation for production of CH4 from gas hydrate reservoirs using CO2/CO2+ N2 by HydrateResSim. Cryogenics, .
  129. Anderson, B., Garapati, N., & McGuire, P. (2013). Reservoir Modelling and Numerical Analysis of the Iġnik Sikumi Gas Hydrate Field Trial. Materials Advances, cp-349-00004.
  130. Mebane, D. S., Kress, J. D., Storlie, C. B., Fauth, D. J., Gray, M. L., & Li, K. (2013). Transport, Zwitterions, and the Role of Water for CO2 Adsorption in Mesoporous Silica-Supported Amine Sorbents. The Journal of Physical Chemistry C, 117(50), 26617-26627.